High Throughput Sequencer

Tender description

The MRC Unit the Gambia at LSHTM intends to purchase an Illumina Novaseq 6000 sequencing system including delivery (to the Gambia), installation, validation and training. The high throughput sequencer is capable of sequencing very large genomes. Also included is Illumina Dragen Server and Licence. Lot 1: High Throughput DNA Sequencer - Illumina Novaseq 6000 system and Dragen Server Software. System specifications Output range: 80-6000Gb Paired end reads per run: 1.6B - 40B Maximum read length: 2 x 250bp Run time: 13 – 44 hours Flow cell type: SP, S1, S2, S4 Reads passing filter per flow cell: Single-end reads upto 8-10B and paired-end reads 16-20B Quality scores: between 75 to greater than 90% bases higher than Q30 Instrument Specifications Instrument configuration Computer and touch screen display Installation setup and accessories Data collection and analysis software Instrument control computer Base unit: Portwell WADE-8022 with Intel i7 4700EQ CPU Memory: 2 x 8 GB DDR3L SODIMM Hard Drive: None Solid-State Drive: 256GB mSATA Operating system: Windows 10 or higher Laser Wavelengths: 532nm, 660nm, 780nm, 790nm Power requirements 200-240 VAC 50/60Hz, 16A, single phase, 2500 W Network connection Dedicated 1 Gb connection between the instrument and data management system. Bandwidth for network connection 200 Mb/s/instrument for internal network uploads 200 Mb/s/instrument for cloud base uploads 5Mb/s/instrument for instrument operational Data uploads